IL_8ZFI_053
3D structure
- PDB id
- 8ZFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UACAAAG*CAUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 8ZFI|1|A|U|1286
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZFI_053 not in the Motif Atlas
- Geometric match to IL_4LFB_051
- Geometric discrepancy: 0.2528
- The information below is about IL_4LFB_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12056.1
- Basepair signature
- cWW-L-R-R-bif-cWW
- Number of instances in this motif group
- 2
Unit IDs
8ZFI|1|A|U|1247
8ZFI|1|A|A|1248
8ZFI|1|A|C|1249
8ZFI|1|A|A|1250
8ZFI|1|A|A|1251
8ZFI|1|A|A|1252
8ZFI|1|A|G|1253
*
8ZFI|1|A|C|1284
8ZFI|1|A|A|1285
8ZFI|1|A|U|1286
8ZFI|1|A|A|1287
8ZFI|1|A|A|1288
8ZFI|1|A|A|1289
8ZFI|1|A|G|1290
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
Coloring options: