IL_8ZGR_016

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AAAG*CUU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGR|1|LA|A|416
8ZGR|1|LA|A|417
8ZGR|1|LA|A|418
8ZGR|1|LA|G|419
*
8ZGR|1|LC|C|4
8ZGR|1|LC|U|5
8ZGR|1|LC|U|6

Current chains

Chain LA

25S rRNA (3393-MER)

Chain LC

5.8S rRNA (158-MER)

Nearby chains

Chain LR

Large ribosomal subunit protein uL22A

Chain Lg

Large ribosomal subunit protein eL32