IL_8ZGR_019

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGAUAAAUC*GGAAUAC

Length

16 nucleotides

Bulged bases

8ZGR|1|LA|A|518, 8ZGR|1|LA|U|519, 8ZGR|1|LA|G|567

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGR|1|LA|G|516
8ZGR|1|LA|G|517
8ZGR|1|LA|A|518
8ZGR|1|LA|U|519
8ZGR|1|LA|A|520
8ZGR|1|LA|A|521
8ZGR|1|LA|A|522
8ZGR|1|LA|U|523
8ZGR|1|LA|C|524
*
8ZGR|1|LA|G|566
8ZGR|1|LA|G|567
8ZGR|1|LA|A|568
8ZGR|1|LA|A|569
8ZGR|1|LA|U|570
8ZGR|1|LA|A|571
8ZGR|1|LA|C|572

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LF

Large ribosomal subunit protein uL4A

Chain LI

Large ribosomal subunit protein uL30A

Chain LO

Large ribosomal subunit protein eL14A

Chain LU

Large ribosomal subunit protein eL20A