IL_8ZGR_044

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUUCCGGG*CUUGAC

Length

14 nucleotides

Bulged bases

8ZGR|1|LA|C|1016, 8ZGR|1|LA|G|1034

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGR|1|LA|G|1012
8ZGR|1|LA|U|1013
8ZGR|1|LA|U|1014
8ZGR|1|LA|C|1015
8ZGR|1|LA|C|1016
8ZGR|1|LA|G|1017
8ZGR|1|LA|G|1018
8ZGR|1|LA|G|1019
*
8ZGR|1|LA|C|1031
8ZGR|1|LA|U|1032
8ZGR|1|LA|U|1033
8ZGR|1|LA|G|1034
8ZGR|1|LA|A|1035
8ZGR|1|LA|C|1036

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LL

Large ribosomal subunit protein uL16

Chain Ta

Transfer RNA; tRNA