IL_8ZGR_056

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUGGCC*GGAAUC

Length

12 nucleotides

Bulged bases

8ZGR|1|LA|G|1235, 8ZGR|1|LA|A|1251, 8ZGR|1|LA|U|1252

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGR|1|LA|G|1233
8ZGR|1|LA|U|1234
8ZGR|1|LA|G|1235
8ZGR|1|LA|G|1236
8ZGR|1|LA|C|1237
8ZGR|1|LA|C|1238
*
8ZGR|1|LA|G|1248
8ZGR|1|LA|G|1249
8ZGR|1|LA|A|1250
8ZGR|1|LA|A|1251
8ZGR|1|LA|U|1252
8ZGR|1|LA|C|1253

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains