IL_8ZGR_068

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UCUUC*GGAAUA

Length

11 nucleotides

Bulged bases

8ZGR|1|LA|C|1627, 8ZGR|1|LA|U|1628, 8ZGR|1|LA|U|1814

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGR|1|LA|U|1626
8ZGR|1|LA|C|1627
8ZGR|1|LA|U|1628
8ZGR|1|LA|U|1629
8ZGR|1|LA|C|1630
*
8ZGR|1|LA|G|1810
8ZGR|1|LA|G|1811
8ZGR|1|LA|A|1812
8ZGR|1|LA|A|1813
8ZGR|1|LA|U|1814
8ZGR|1|LA|A|1815

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain Lb

Large ribosomal subunit protein eL27A