IL_8ZGR_076

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AAUAAUG*CUAU

Length

11 nucleotides

Bulged bases

8ZGR|1|LA|A|1883, 8ZGR|1|LA|U|1884

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGR|1|LA|A|1882
8ZGR|1|LA|A|1883
8ZGR|1|LA|U|1884
8ZGR|1|LA|A|1885
8ZGR|1|LA|A|1886
8ZGR|1|LA|U|1887
8ZGR|1|LA|G|1888
*
8ZGR|1|LA|C|2345
8ZGR|1|LA|U|2346
8ZGR|1|LA|A|2347
8ZGR|1|LA|U|2348

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LE

Large ribosomal subunit protein uL3

Chain LR

Large ribosomal subunit protein uL22A

Chain Lf

Large ribosomal subunit protein eL31A