IL_8ZGR_141
3D structure
- PDB id
- 8ZGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAAAGCAC*GUUAAGC
- Length
- 15 nucleotides
- Bulged bases
- 8ZGR|1|LB|A|27
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZGR|1|LB|G|21
8ZGR|1|LB|A|22
8ZGR|1|LB|A|23
8ZGR|1|LB|A|24
8ZGR|1|LB|G|25
8ZGR|1|LB|C|26
8ZGR|1|LB|A|27
8ZGR|1|LB|C|28
*
8ZGR|1|LB|G|52
8ZGR|1|LB|U|53
8ZGR|1|LB|U|54
8ZGR|1|LB|A|55
8ZGR|1|LB|A|56
8ZGR|1|LB|G|57
8ZGR|1|LB|C|58
Current chains
- Chain LB
- 5S rRNA (121-MER)
Nearby chains
- Chain LG
- Large ribosomal subunit protein uL18
- Chain LM
- Large ribosomal subunit protein uL5B
Coloring options: