IL_8ZGR_185

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

ACGUUU*AUCGU

Length

11 nucleotides

Bulged bases

8ZGR|1|S2|U|820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGR|1|S2|A|817
8ZGR|1|S2|C|818
8ZGR|1|S2|G|819
8ZGR|1|S2|U|820
8ZGR|1|S2|U|821
8ZGR|1|S2|U|822
*
8ZGR|1|S2|A|850
8ZGR|1|S2|U|851
8ZGR|1|S2|C|852
8ZGR|1|S2|G|853
8ZGR|1|S2|U|854

Current chains

Chain S2

chain 2 18S rRNA (1800-MER)

Nearby chains

Chain LT

Large ribosomal subunit protein eL19A

Chain SU

Small ribosomal subunit protein eS7A