IL_8ZGR_203
3D structure
- PDB id
- 8ZGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AUAAGGAUUG*CUUGAUUU
- Length
- 18 nucleotides
- Bulged bases
- 8ZGR|1|S2|U|1225, 8ZGR|1|S2|A|1226, 8ZGR|1|S2|G|1228, 8ZGR|1|S2|U|1257, 8ZGR|1|S2|U|1258
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZGR|1|S2|A|1224
8ZGR|1|S2|U|1225
8ZGR|1|S2|A|1226
8ZGR|1|S2|A|1227
8ZGR|1|S2|G|1228
8ZGR|1|S2|G|1229
8ZGR|1|S2|A|1230
8ZGR|1|S2|U|1231
8ZGR|1|S2|U|1232
8ZGR|1|S2|G|1233
*
8ZGR|1|S2|C|1252
8ZGR|1|S2|U|1253
8ZGR|1|S2|U|1254
8ZGR|1|S2|G|1255
8ZGR|1|S2|A|1256
8ZGR|1|S2|U|1257
8ZGR|1|S2|U|1258
8ZGR|1|S2|U|1259
Current chains
- Chain S2
- chain 2 18S rRNA (1800-MER)
Nearby chains
- Chain SC
- Small ribosomal subunit protein eS10A
- Chain SD
- Small ribosomal subunit protein eS12
- Chain SM
- Small ribosomal subunit protein uS14A
- Chain SN
- Small ribosomal subunit protein eS31
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