IL_8ZGR_212

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUAC*GAG

Length

7 nucleotides

Bulged bases

8ZGR|1|S2|U|1340

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGR|1|S2|C|1339
8ZGR|1|S2|U|1340
8ZGR|1|S2|A|1341
8ZGR|1|S2|C|1342
*
8ZGR|1|S2|G|1383
8ZGR|1|S2|A|1384
8ZGR|1|S2|G|1385

Current chains

Chain S2

chain 2 18S rRNA (1800-MER)

Nearby chains

Chain SF

Small ribosomal subunit protein uS9A

Chain SG

Small ribosomal subunit protein eS17A

Chain SJ

Small ribosomal subunit protein uS10

Chain SO

Small ribosomal subunit protein RACK1