IL_8ZGR_217
3D structure
- PDB id
- 8ZGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/A tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUCUAAC*GUAAUC
- Length
- 13 nucleotides
- Bulged bases
- 8ZGR|1|S2|U|1491, 8ZGR|1|S2|A|1493, 8ZGR|1|S2|A|1516, 8ZGR|1|S2|U|1517
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZGR|1|S2|G|1488
8ZGR|1|S2|U|1489
8ZGR|1|S2|C|1490
8ZGR|1|S2|U|1491
8ZGR|1|S2|A|1492
8ZGR|1|S2|A|1493
8ZGR|1|S2|C|1494
*
8ZGR|1|S2|G|1513
8ZGR|1|S2|U|1514
8ZGR|1|S2|A|1515
8ZGR|1|S2|A|1516
8ZGR|1|S2|U|1517
8ZGR|1|S2|C|1518
Current chains
- Chain S2
- chain 2 18S rRNA (1800-MER)
Nearby chains
- Chain SA
- Small ribosomal subunit protein uS3
- Chain SI
- Small ribosomal subunit protein eS19A
- Chain SJ
- Small ribosomal subunit protein uS10
- Chain SM
- Small ribosomal subunit protein uS14A
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