IL_8ZGY_009

3D structure

PDB id

8ZGY (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with P/E tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UGG*CUUUGUA

Length

10 nucleotides

Bulged bases

8ZGY|1|LA|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGY|1|LA|U|169
8ZGY|1|LA|G|170
8ZGY|1|LA|G|171
*
8ZGY|1|LA|C|247
8ZGY|1|LA|U|248
8ZGY|1|LA|U|249
8ZGY|1|LA|U|250
8ZGY|1|LA|G|251
8ZGY|1|LA|U|252
8ZGY|1|LA|A|253

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LJ

Large ribosomal subunit protein eL8A

Chain LN

Large ribosomal subunit protein eL13A

Chain Lj

Large ribosomal subunit protein uL29A