IL_8ZGY_166
3D structure
- PDB id
- 8ZGY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CCAAUC*GGAG
- Length
- 10 nucleotides
- Bulged bases
- 8ZGY|1|S2|A|445, 8ZGY|1|S2|G|459
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZGY|1|S2|C|443
8ZGY|1|S2|C|444
8ZGY|1|S2|A|445
8ZGY|1|S2|A|446
8ZGY|1|S2|U|447
8ZGY|1|S2|C|448
*
8ZGY|1|S2|G|458
8ZGY|1|S2|G|459
8ZGY|1|S2|A|460
8ZGY|1|S2|G|461
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain SS
- Small ribosomal subunit protein eS4A
- Chain SW
- Small ribosomal subunit protein uS4A
- Chain Sd
- Small ribosomal subunit protein eS24A
Coloring options: