IL_8ZGY_211
3D structure
- PDB id
- 8ZGY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UAAAUA*UUCUUA
- Length
- 12 nucleotides
- Bulged bases
- 8ZGY|1|S2|A|1346, 8ZGY|1|S2|U|1347
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZGY|1|S2|U|1343
8ZGY|1|S2|A|1344
8ZGY|1|S2|A|1345
8ZGY|1|S2|A|1346
8ZGY|1|S2|U|1347
8ZGY|1|S2|A|1348
*
8ZGY|1|S2|U|1377
8ZGY|1|S2|U|1378
8ZGY|1|S2|C|1379
8ZGY|1|S2|U|1380
8ZGY|1|S2|U|1381
8ZGY|1|S2|A|1382
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain SF
- Small ribosomal subunit protein uS9A
- Chain SJ
- Small ribosomal subunit protein uS10
- Chain SO
- Small ribosomal subunit protein RACK1
Coloring options: