IL_8ZH3_051

3D structure

PDB id

8ZH3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/P-P/E tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AUCUAGACAG*CCGAAU

Length

16 nucleotides

Bulged bases

8ZH3|1|LA|U|1220, 8ZH3|1|LA|A|1221, 8ZH3|1|LA|C|1284

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZH3|1|LA|A|1217
8ZH3|1|LA|U|1218
8ZH3|1|LA|C|1219
8ZH3|1|LA|U|1220
8ZH3|1|LA|A|1221
8ZH3|1|LA|G|1222
8ZH3|1|LA|A|1223
8ZH3|1|LA|C|1224
8ZH3|1|LA|A|1225
8ZH3|1|LA|G|1226
*
8ZH3|1|LA|C|1283
8ZH3|1|LA|C|1284
8ZH3|1|LA|G|1285
8ZH3|1|LA|A|1286
8ZH3|1|LA|A|1287
8ZH3|1|LA|U|1288

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LU

Large ribosomal subunit protein eL20A

Chain Lo

Large ribosomal subunit protein eL40A