IL_8ZH3_115
3D structure
- PDB id
- 8ZH3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/P-P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UAAUU*ACCA
- Length
- 9 nucleotides
- Bulged bases
- 8ZH3|1|LA|C|3092, 8ZH3|1|LA|C|3093
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZH3_115 not in the Motif Atlas
- Homologous match to IL_8P9A_345
- Geometric discrepancy: 0.1044
- The information below is about IL_8P9A_345
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06671.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
8ZH3|1|LA|U|3047
8ZH3|1|LA|A|3048
8ZH3|1|LA|A|3049
8ZH3|1|LA|U|3050
8ZH3|1|LA|U|3051
*
8ZH3|1|LA|A|3091
8ZH3|1|LA|C|3092
8ZH3|1|LA|C|3093
8ZH3|1|LA|A|3094
Current chains
- Chain LA
- 25S rRNA (3393-MER)
Nearby chains
- Chain LE
- Large ribosomal subunit protein uL3
- Chain LX
- Large ribosomal subunit protein uL14A
- Chain LY
- Large ribosomal subunit protein eL24A
Coloring options: