IL_8ZH3_119

3D structure

PDB id

8ZH3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/P-P/E tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAC*GCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ZH3_119 not in the Motif Atlas

Homologous match to IL_8CRE_130

Geometric discrepancy: 0.5806

The information below is about IL_8CRE_130

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

8ZH3|1|LA|C|3164
8ZH3|1|LA|A|3165
8ZH3|1|LA|C|3166
*
8ZH3|1|LA|G|3284
8ZH3|1|LA|C|3285
8ZH3|1|LA|G|3286

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains