IL_8ZH3_150
3D structure
- PDB id
- 8ZH3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/P-P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UAUAAG*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 8ZH3|1|S2|U|66, 8ZH3|1|S2|A|68
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZH3_150 not in the Motif Atlas
- Geometric match to IL_8P9A_379
- Geometric discrepancy: 0.2114
- The information below is about IL_8P9A_379
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21667.2
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
8ZH3|1|S2|U|64
8ZH3|1|S2|A|65
8ZH3|1|S2|U|66
8ZH3|1|S2|A|67
8ZH3|1|S2|A|68
8ZH3|1|S2|G|69
*
8ZH3|1|S2|U|82
8ZH3|1|S2|G|83
8ZH3|1|S2|A|84
8ZH3|1|S2|A|85
8ZH3|1|S2|A|86
Current chains
- Chain S2
- chain 2 18S rRNA (1771-MER)
Nearby chains
- Chain ST
- Small ribosomal subunit protein eS6A
- Chain Sd
- Small ribosomal subunit protein eS24A
Coloring options: