IL_8ZHB_043

3D structure

PDB id

8ZHB (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A P/E tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUU*GUG

Length

6 nucleotides

Bulged bases

8ZHB|1|LA|U|1069

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ZHB_043 not in the Motif Atlas

Geometric match to IL_2GUN_002

Geometric discrepancy: 0.2861

The information below is about IL_2GUN_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31737.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

8ZHB|1|LA|C|1068
8ZHB|1|LA|U|1069
8ZHB|1|LA|U|1070
*
8ZHB|1|LA|G|1086
8ZHB|1|LA|U|1087
8ZHB|1|LA|G|1088

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain Ld

Large ribosomal subunit protein eL29