IL_8ZHB_061

3D structure

PDB id

8ZHB (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A P/E tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUCAAC*GGAC

Length

10 nucleotides

Bulged bases

8ZHB|1|LA|G|1513

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZHB|1|LA|G|1499
8ZHB|1|LA|U|1500
8ZHB|1|LA|C|1501
8ZHB|1|LA|A|1502
8ZHB|1|LA|A|1503
8ZHB|1|LA|C|1504
*
8ZHB|1|LA|G|1512
8ZHB|1|LA|G|1513
8ZHB|1|LA|A|1514
8ZHB|1|LA|C|1515

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LR

Large ribosomal subunit protein uL22A

Chain LT

Large ribosomal subunit protein eL19A

Chain Ln

Large ribosomal subunit protein eL39