IL_8ZHC_023

3D structure

PDB id

8ZHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GUUUG*CAUAC

Length

10 nucleotides

Bulged bases

8ZHC|1|LA|A|696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZHC|1|LA|G|679
8ZHC|1|LA|U|680
8ZHC|1|LA|U|681
8ZHC|1|LA|U|682
8ZHC|1|LA|G|683
*
8ZHC|1|LA|C|695
8ZHC|1|LA|A|696
8ZHC|1|LA|U|697
8ZHC|1|LA|A|698
8ZHC|1|LA|C|699

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LF

Large ribosomal subunit protein uL4A

Chain LN

Large ribosomal subunit protein eL13A

Chain LP

Large ribosomal subunit protein eL15A

Chain Lc

Large ribosomal subunit protein uL15