IL_8ZHC_044

3D structure

PDB id

8ZHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GUUCCGGG*CUUGAC

Length

14 nucleotides

Bulged bases

8ZHC|1|LA|U|1014, 8ZHC|1|LA|C|1015

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZHC|1|LA|G|1012
8ZHC|1|LA|U|1013
8ZHC|1|LA|U|1014
8ZHC|1|LA|C|1015
8ZHC|1|LA|C|1016
8ZHC|1|LA|G|1017
8ZHC|1|LA|G|1018
8ZHC|1|LA|G|1019
*
8ZHC|1|LA|C|1031
8ZHC|1|LA|U|1032
8ZHC|1|LA|U|1033
8ZHC|1|LA|G|1034
8ZHC|1|LA|A|1035
8ZHC|1|LA|C|1036

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LL

Large ribosomal subunit protein uL16