IL_8ZHC_099

3D structure

PDB id

8ZHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

CAUAGAG*CUUUAUAG

Length

15 nucleotides

Bulged bases

8ZHC|1|LA|U|2496, 8ZHC|1|LA|U|2500

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZHC|1|LA|C|2443
8ZHC|1|LA|A|2444
8ZHC|1|LA|U|2445
8ZHC|1|LA|A|2446
8ZHC|1|LA|G|2447
8ZHC|1|LA|A|2448
8ZHC|1|LA|G|2449
*
8ZHC|1|LA|C|2495
8ZHC|1|LA|U|2496
8ZHC|1|LA|U|2497
8ZHC|1|LA|U|2498
8ZHC|1|LA|A|2499
8ZHC|1|LA|U|2500
8ZHC|1|LA|A|2501
8ZHC|1|LA|G|2502

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain Lk

Large ribosomal subunit protein eL36A

Chain SQ

Small ribosomal subunit protein eS1A