IL_8ZHC_139
3D structure
- PDB id
- 8ZHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GAAAGCACC*GUAGUUAAGC
- Length
- 19 nucleotides
- Bulged bases
- 8ZHC|1|LB|G|52
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHC|1|LB|G|21
8ZHC|1|LB|A|22
8ZHC|1|LB|A|23
8ZHC|1|LB|A|24
8ZHC|1|LB|G|25
8ZHC|1|LB|C|26
8ZHC|1|LB|A|27
8ZHC|1|LB|C|28
8ZHC|1|LB|C|29
*
8ZHC|1|LB|G|49
8ZHC|1|LB|U|50
8ZHC|1|LB|A|51
8ZHC|1|LB|G|52
8ZHC|1|LB|U|53
8ZHC|1|LB|U|54
8ZHC|1|LB|A|55
8ZHC|1|LB|A|56
8ZHC|1|LB|G|57
8ZHC|1|LB|C|58
Current chains
- Chain LB
- 5S rRNA (121-MER)
Nearby chains
- Chain LG
- Large ribosomal subunit protein uL18
- Chain LM
- Large ribosomal subunit protein uL5B
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