IL_8ZHC_151
3D structure
- PDB id
- 8ZHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- UAUAAG*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 8ZHC|1|S2|U|66, 8ZHC|1|S2|A|68
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZHC_151 not in the Motif Atlas
- Geometric match to IL_8P9A_379
- Geometric discrepancy: 0.1448
- The information below is about IL_8P9A_379
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21667.2
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
8ZHC|1|S2|U|64
8ZHC|1|S2|A|65
8ZHC|1|S2|U|66
8ZHC|1|S2|A|67
8ZHC|1|S2|A|68
8ZHC|1|S2|G|69
*
8ZHC|1|S2|U|82
8ZHC|1|S2|G|83
8ZHC|1|S2|A|84
8ZHC|1|S2|A|85
8ZHC|1|S2|A|86
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain ST
- Small ribosomal subunit protein eS6A
- Chain Sd
- Small ribosomal subunit protein eS24A
Coloring options: