IL_8ZHC_158
3D structure
- PDB id
- 8ZHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GUAUUUAUUA*UAAUAACUUUUC
- Length
- 22 nucleotides
- Bulged bases
- 8ZHC|1|S2|U|212, 8ZHC|1|S2|U|260, 8ZHC|1|S2|U|261
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHC|1|S2|G|204
8ZHC|1|S2|U|205
8ZHC|1|S2|A|206
8ZHC|1|S2|U|207
8ZHC|1|S2|U|208
8ZHC|1|S2|U|209
8ZHC|1|S2|A|210
8ZHC|1|S2|U|211
8ZHC|1|S2|U|212
8ZHC|1|S2|A|213
*
8ZHC|1|S2|U|252
8ZHC|1|S2|A|253
8ZHC|1|S2|A|254
8ZHC|1|S2|U|255
8ZHC|1|S2|A|256
8ZHC|1|S2|A|257
8ZHC|1|S2|C|258
8ZHC|1|S2|U|259
8ZHC|1|S2|U|260
8ZHC|1|S2|U|261
8ZHC|1|S2|U|262
8ZHC|1|S2|C|263
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain SS
- Small ribosomal subunit protein eS4A
- Chain ST
- Small ribosomal subunit protein eS6A
- Chain SV
- Small ribosomal subunit protein eS8A
- Chain SX
- Small ribosomal subunit protein uS17A
Coloring options: