IL_8ZHC_167
3D structure
- PDB id
- 8ZHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GGG*CGAUUC
- Length
- 9 nucleotides
- Bulged bases
- 8ZHC|1|S2|U|380
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ZHC_167 not in the Motif Atlas
- Geometric match to IL_8CRE_410
- Geometric discrepancy: 0.0645
- The information below is about IL_8CRE_410
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93336.1
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
8ZHC|1|S2|G|363
8ZHC|1|S2|G|364
8ZHC|1|S2|G|365
*
8ZHC|1|S2|C|376
8ZHC|1|S2|G|377
8ZHC|1|S2|A|378
8ZHC|1|S2|U|379
8ZHC|1|S2|U|380
8ZHC|1|S2|C|381
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain SS
- Small ribosomal subunit protein eS4A
- Chain SW
- Small ribosomal subunit protein uS4A
- Chain Sc
- Small ribosomal subunit protein uS12A
Coloring options: