IL_8ZHC_187
3D structure
- PDB id
- 8ZHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- ACGUUUGGUUC*GGACCAUCGU
- Length
- 21 nucleotides
- Bulged bases
- 8ZHC|1|S2|U|820, 8ZHC|1|S2|G|846, 8ZHC|1|S2|A|847, 8ZHC|1|S2|C|849, 8ZHC|1|S2|C|852
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHC|1|S2|A|817
8ZHC|1|S2|C|818
8ZHC|1|S2|G|819
8ZHC|1|S2|U|820
8ZHC|1|S2|U|821
8ZHC|1|S2|U|822
8ZHC|1|S2|G|823
8ZHC|1|S2|G|824
8ZHC|1|S2|U|825
8ZHC|1|S2|U|826
8ZHC|1|S2|C|827
*
8ZHC|1|S2|G|845
8ZHC|1|S2|G|846
8ZHC|1|S2|A|847
8ZHC|1|S2|C|848
8ZHC|1|S2|C|849
8ZHC|1|S2|A|850
8ZHC|1|S2|U|851
8ZHC|1|S2|C|852
8ZHC|1|S2|G|853
8ZHC|1|S2|U|854
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain LT
- Large ribosomal subunit protein eL19A
- Chain SU
- Small ribosomal subunit protein eS7A
- Chain SX
- Small ribosomal subunit protein uS17A
Coloring options: