IL_8ZHC_194
3D structure
- PDB id
- 8ZHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- AGGGGAUC*GUCU
- Length
- 12 nucleotides
- Bulged bases
- 8ZHC|1|S2|G|987
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHC|1|S2|A|983
8ZHC|1|S2|G|984
8ZHC|1|S2|G|985
8ZHC|1|S2|G|986
8ZHC|1|S2|G|987
8ZHC|1|S2|A|988
8ZHC|1|S2|U|989
8ZHC|1|S2|C|990
*
8ZHC|1|S2|G|1014
8ZHC|1|S2|U|1015
8ZHC|1|S2|C|1016
8ZHC|1|S2|U|1017
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain LD
- Large ribosomal subunit protein uL2A
- Chain Lr
- Large ribosomal subunit protein eL43A
- Chain SY
- Small ribosomal subunit protein uS15
- Chain SZ
- Small ribosomal subunit protein uS11B
- Chain Se
- Small ribosomal subunit protein eS26B
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