IL_8ZHC_207
3D structure
- PDB id
- 8ZHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GGUGCA*UGC
- Length
- 9 nucleotides
- Bulged bases
- 8ZHC|1|S2|G|1273, 8ZHC|1|S2|C|1274
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHC|1|S2|G|1270
8ZHC|1|S2|G|1271
8ZHC|1|S2|U|1272
8ZHC|1|S2|G|1273
8ZHC|1|S2|C|1274
8ZHC|1|S2|A|1275
*
8ZHC|1|S2|U|1437
8ZHC|1|S2|G|1438
8ZHC|1|S2|C|1439
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain SA
- Small ribosomal subunit protein uS3
- Chain SC
- Small ribosomal subunit protein eS10A
- Chain SJ
- Small ribosomal subunit protein uS10
- Chain eR
- Eukaryotic peptide chain release factor subunit 1
- Chain mR
- RNA (5'-R(P*GP*AP*CP*CP*CP*UP*UP*AP*AP*C)-3')
Coloring options: