IL_8ZHC_213
3D structure
- PDB id
- 8ZHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- CUAUC*GAUGGAAG
- Length
- 13 nucleotides
- Bulged bases
- 8ZHC|1|S2|U|1390, 8ZHC|1|S2|U|1407, 8ZHC|1|S2|A|1410, 8ZHC|1|S2|A|1411
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHC|1|S2|C|1389
8ZHC|1|S2|U|1390
8ZHC|1|S2|A|1391
8ZHC|1|S2|U|1392
8ZHC|1|S2|C|1393
*
8ZHC|1|S2|G|1405
8ZHC|1|S2|A|1406
8ZHC|1|S2|U|1407
8ZHC|1|S2|G|1408
8ZHC|1|S2|G|1409
8ZHC|1|S2|A|1410
8ZHC|1|S2|A|1411
8ZHC|1|S2|G|1412
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain SB
- Small ribosomal subunit protein uS7
- Chain SF
- Small ribosomal subunit protein uS9A
- Chain SG
- Small ribosomal subunit protein eS17A
- Chain SO
- Small ribosomal subunit protein RACK1
Coloring options: