IL_8ZHC_228
3D structure
- PDB id
- 8ZHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GCUUAGAGAAGG*CAUCUCAGAGC
- Length
- 23 nucleotides
- Bulged bases
- 8ZHC|1|S2|C|1686, 8ZHC|1|S2|U|1687, 8ZHC|1|S2|U|1688, 8ZHC|1|S2|A|1689, 8ZHC|1|S2|G|1692, 8ZHC|1|S2|A|1694, 8ZHC|1|S2|G|1695, 8ZHC|1|S2|A|1707, 8ZHC|1|S2|C|1711, 8ZHC|1|S2|A|1712, 8ZHC|1|S2|G|1713, 8ZHC|1|S2|A|1714, 8ZHC|1|S2|G|1715
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHC|1|S2|G|1685
8ZHC|1|S2|C|1686
8ZHC|1|S2|U|1687
8ZHC|1|S2|U|1688
8ZHC|1|S2|A|1689
8ZHC|1|S2|G|1690
8ZHC|1|S2|A|1691
8ZHC|1|S2|G|1692
8ZHC|1|S2|A|1693
8ZHC|1|S2|A|1694
8ZHC|1|S2|G|1695
8ZHC|1|S2|G|1696
*
8ZHC|1|S2|C|1706
8ZHC|1|S2|A|1707
8ZHC|1|S2|U|1708
8ZHC|1|S2|C|1709
8ZHC|1|S2|U|1710
8ZHC|1|S2|C|1711
8ZHC|1|S2|A|1712
8ZHC|1|S2|G|1713
8ZHC|1|S2|A|1714
8ZHC|1|S2|G|1715
8ZHC|1|S2|C|1716
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain ST
- Small ribosomal subunit protein eS6A
Coloring options: