IL_8ZTU_121

3D structure

PDB id

8ZTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGUAG*UGAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ZTU_121 not in the Motif Atlas

Homologous match to IL_5J7L_300

Geometric discrepancy: 0.0852

The information below is about IL_5J7L_300

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_38862.4

Basepair signature

cWW-cSH-R-tWH-tHS-cWW

Number of instances in this motif group

5

Unit IDs

8ZTU|1|a|U|1474
8ZTU|1|a|G|1475
8ZTU|1|a|U|1476
8ZTU|1|a|A|1477
8ZTU|1|a|G|1478
*
8ZTU|1|a|U|1513
8ZTU|1|a|G|1514
8ZTU|1|a|A|1515
8ZTU|1|a|G|1516
8ZTU|1|a|G|1517

Current chains

Chain a

23S rRNA

Nearby chains