IL_9AX7_115
3D structure
- PDB id
- 9AX7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S initiation complex (tRNA-fMet M1 + CUG start codon)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- GAAG*CCUGC
- Length
- 9 nucleotides
- Bulged bases
- 9AX7|1|a|U|1559
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9AX7_115 not in the Motif Atlas
- Homologous match to IL_5J7L_296
- Geometric discrepancy: 0.1229
- The information below is about IL_5J7L_296
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_58112.2
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
9AX7|1|a|G|1432
9AX7|1|a|A|1433
9AX7|1|a|A|1434
9AX7|1|a|G|1435
*
9AX7|1|a|C|1557
9AX7|1|a|C|1558
9AX7|1|a|U|1559
9AX7|1|a|G|1560
9AX7|1|a|C|1561
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
Coloring options: