IL_9AXU_011
3D structure
- PDB id
- 9AXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Non-translating S. pombe ribosome large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.94 Å
Loop
- Sequence
- UAGAC*GAUUGGA
- Length
- 12 nucleotides
- Bulged bases
- 9AXU|1|2|U|247
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9AXU_011 not in the Motif Atlas
- Geometric match to IL_6CZR_167
- Geometric discrepancy: 0.3766
- The information below is about IL_6CZR_167
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
9AXU|1|2|U|180
9AXU|1|2|A|181
9AXU|1|2|G|182
9AXU|1|2|A|183
9AXU|1|2|C|184
*
9AXU|1|2|G|244
9AXU|1|2|A|245
9AXU|1|2|U|246
9AXU|1|2|U|247
9AXU|1|2|G|248
9AXU|1|2|G|249
9AXU|1|2|A|250
Current chains
- Chain 2
- 28S ribosomal RNA
Nearby chains
- Chain X
- Large ribosomal subunit protein eL13
- Chain t
- Large ribosomal subunit protein uL29
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