IL_9AXU_016

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

GUGAGAUCAGUA*UGCACUCUGAACC

Length

25 nucleotides

Bulged bases

9AXU|1|2|A|461, 9AXU|1|2|C|489, 9AXU|1|2|C|491

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AXU|1|2|G|456
9AXU|1|2|U|457
9AXU|1|2|G|458
9AXU|1|2|A|459
9AXU|1|2|G|460
9AXU|1|2|A|461
9AXU|1|2|U|462
9AXU|1|2|C|463
9AXU|1|2|A|464
9AXU|1|2|G|465
9AXU|1|2|U|466
9AXU|1|2|A|467
*
9AXU|1|2|U|485
9AXU|1|2|G|486
9AXU|1|2|C|487
9AXU|1|2|A|488
9AXU|1|2|C|489
9AXU|1|2|U|490
9AXU|1|2|C|491
9AXU|1|2|U|492
9AXU|1|2|G|493
9AXU|1|2|A|494
9AXU|1|2|A|495
9AXU|1|2|C|496
9AXU|1|2|C|497

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain y

Large ribosomal subunit protein eL28