IL_9AXU_053

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

CGU*AGUG

Length

7 nucleotides

Bulged bases

9AXU|1|2|G|1463

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_10892.1

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

39

Unit IDs

9AXU|1|2|C|1410
9AXU|1|2|G|1411
9AXU|1|2|U|1412
*
9AXU|1|2|A|1462
9AXU|1|2|G|1463
9AXU|1|2|U|1464
9AXU|1|2|G|1465

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain 4

5.8S ribosomal RNA; 5.8S rRNA

Chain P

Large ribosomal subunit protein uL4A

Chain m

Large ribosomal subunit protein uL15B

Chain q

Large ribosomal subunit protein eL32A

Chain y

Large ribosomal subunit protein eL28