IL_9AXU_060
3D structure
- PDB id
- 9AXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Non-translating S. pombe ribosome large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.94 Å
Loop
- Sequence
- CUAAG*CGAAAG
- Length
- 11 nucleotides
- Bulged bases
- 9AXU|1|2|A|1623, 9AXU|1|2|A|1624
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
9AXU|1|2|C|1566
9AXU|1|2|U|1567
9AXU|1|2|A|1568
9AXU|1|2|A|1569
9AXU|1|2|G|1570
*
9AXU|1|2|C|1620
9AXU|1|2|G|1621
9AXU|1|2|A|1622
9AXU|1|2|A|1623
9AXU|1|2|A|1624
9AXU|1|2|G|1625
Current chains
- Chain 2
- 28S ribosomal RNA
Nearby chains
- Chain 4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain N
- Large ribosomal subunit protein uL2C
- Chain s
- Large ribosomal subunit protein eL34B
- Chain v
- Large ribosomal subunit protein eL37B
- Chain x
- Large ribosomal subunit protein eL39
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