IL_9AXU_067

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

UUAAC*GGAAGA

Length

11 nucleotides

Bulged bases

9AXU|1|2|G|1791

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25943.1

Basepair signature

cWW-tWH-tHH-tHS-cWW

Number of instances in this motif group

5

Unit IDs

9AXU|1|2|U|1729
9AXU|1|2|U|1730
9AXU|1|2|A|1731
9AXU|1|2|A|1732
9AXU|1|2|C|1733
*
9AXU|1|2|G|1787
9AXU|1|2|G|1788
9AXU|1|2|A|1789
9AXU|1|2|A|1790
9AXU|1|2|G|1791
9AXU|1|2|A|1792

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain s

Large ribosomal subunit protein eL34B

Chain w

Large ribosomal subunit protein eL38A