IL_9AXU_068

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

CCAUUGAACU*AUGGUG

Length

16 nucleotides

Bulged bases

9AXU|1|2|C|1745, 9AXU|1|2|U|1782

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AXU|1|2|C|1737
9AXU|1|2|C|1738
9AXU|1|2|A|1739
9AXU|1|2|U|1740
9AXU|1|2|U|1741
9AXU|1|2|G|1742
9AXU|1|2|A|1743
9AXU|1|2|A|1744
9AXU|1|2|C|1745
9AXU|1|2|U|1746
*
9AXU|1|2|A|1778
9AXU|1|2|U|1779
9AXU|1|2|G|1780
9AXU|1|2|G|1781
9AXU|1|2|U|1782
9AXU|1|2|G|1783

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain d

Large ribosomal subunit protein eL19B

Chain s

Large ribosomal subunit protein eL34B