IL_9AXU_070

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

AACAAUG*CUAU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89862.1

Basepair signature

cWW-L-tHS-L-R-L-cWW-L

Number of instances in this motif group

5

Unit IDs

9AXU|1|2|A|1938
9AXU|1|2|A|1939
9AXU|1|2|C|1940
9AXU|1|2|A|1941
9AXU|1|2|A|1942
9AXU|1|2|U|1943
9AXU|1|2|G|1944
*
9AXU|1|2|C|2434
9AXU|1|2|U|2435
9AXU|1|2|A|2436
9AXU|1|2|U|2437

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain O

Large ribosomal subunit protein uL3A

Chain b

Large ribosomal subunit protein uL22A

Chain p

Large ribosomal subunit protein eL31