IL_9AXU_075

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

CGUAAC*GGAUAAG

Length

13 nucleotides

Bulged bases

9AXU|1|2|U|1986

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_20700.1

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

10

Unit IDs

9AXU|1|2|C|1973
9AXU|1|2|G|1974
9AXU|1|2|U|1975
9AXU|1|2|A|1976
9AXU|1|2|A|1977
9AXU|1|2|C|1978
*
9AXU|1|2|G|1983
9AXU|1|2|G|1984
9AXU|1|2|A|1985
9AXU|1|2|U|1986
9AXU|1|2|A|1987
9AXU|1|2|A|1988
9AXU|1|2|G|1989

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain 1

Large ribosomal subunit protein eL43A