IL_9AXU_084

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

CCAAAUGCCUCG*CGCG

Length

16 nucleotides

Bulged bases

9AXU|1|2|A|2369, 9AXU|1|2|C|2375, 9AXU|1|2|C|2394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_84014.1

Basepair signature

cWW-L-R-cHW-cWW-L-L-tSW-L

Number of instances in this motif group

8

Unit IDs

9AXU|1|2|C|2365
9AXU|1|2|C|2366
9AXU|1|2|A|2367
9AXU|1|2|A|2368
9AXU|1|2|A|2369
9AXU|1|2|U|2370
9AXU|1|2|G|2371
9AXU|1|2|C|2372
9AXU|1|2|C|2373
9AXU|1|2|U|2374
9AXU|1|2|C|2375
9AXU|1|2|G|2376
*
9AXU|1|2|C|2392
9AXU|1|2|G|2393
9AXU|1|2|C|2394
9AXU|1|2|G|2395

Current chains

Chain 2

28S ribosomal RNA

Nearby chains