IL_9AXU_086

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

GAA*UACC

Length

7 nucleotides

Bulged bases

9AXU|1|2|A|2485, 9AXU|1|2|C|3078

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80025.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

8

Unit IDs

9AXU|1|2|G|2484
9AXU|1|2|A|2485
9AXU|1|2|A|2486
*
9AXU|1|2|U|3076
9AXU|1|2|A|3077
9AXU|1|2|C|3078
9AXU|1|2|C|3079

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain O

Large ribosomal subunit protein uL3A

Chain b

Large ribosomal subunit protein uL22A