IL_9AXU_096

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

GGCUUGUG*UUUUUGAUUC

Length

18 nucleotides

Bulged bases

9AXU|1|2|U|2955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AXU|1|2|G|2918
9AXU|1|2|G|2919
9AXU|1|2|C|2920
9AXU|1|2|U|2921
9AXU|1|2|U|2922
9AXU|1|2|G|2923
9AXU|1|2|U|2924
9AXU|1|2|G|2925
*
9AXU|1|2|U|2953
9AXU|1|2|U|2954
9AXU|1|2|U|2955
9AXU|1|2|U|2956
9AXU|1|2|U|2957
9AXU|1|2|G|2958
9AXU|1|2|A|2959
9AXU|1|2|U|2960
9AXU|1|2|U|2961
9AXU|1|2|C|2962

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain O

Large ribosomal subunit protein uL3A

Chain V

Large ribosomal subunit protein uL16A

Chain n

Large ribosomal subunit protein eL29