IL_9AXU_097

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

CCAAG*CGACG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87767.1

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

16

Unit IDs

9AXU|1|2|C|2930
9AXU|1|2|C|2931
9AXU|1|2|A|2932
9AXU|1|2|A|2933
9AXU|1|2|G|2934
*
9AXU|1|2|C|2944
9AXU|1|2|G|2945
9AXU|1|2|A|2946
9AXU|1|2|C|2947
9AXU|1|2|G|2948

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain V

Large ribosomal subunit protein uL16A