IL_9AXU_109

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

CUUAGUAC*GGAACCG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_62167.2

Basepair signature

cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

19

Unit IDs

9AXU|1|2|C|3114
9AXU|1|2|U|3115
9AXU|1|2|U|3116
9AXU|1|2|A|3117
9AXU|1|2|G|3118
9AXU|1|2|U|3119
9AXU|1|2|A|3120
9AXU|1|2|C|3121
*
9AXU|1|2|G|3126
9AXU|1|2|G|3127
9AXU|1|2|A|3128
9AXU|1|2|A|3129
9AXU|1|2|C|3130
9AXU|1|2|C|3131
9AXU|1|2|G|3132

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain O

Large ribosomal subunit protein uL3A

Chain U

Large ribosomal subunit protein uL6B

Chain h

Large ribosomal subunit protein uL14B