IL_9AZC_024

3D structure

PDB id

9AZC (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human 80S ribosome (Consensus map)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

9AZC|1|L5|C|685, 9AZC|1|L5|U|687

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AZC|1|L5|A|466
9AZC|1|L5|U|467
9AZC|1|L5|U|468
9AZC|1|L5|C|469
9AZC|1|L5|A|470
9AZC|1|L5|A|471
9AZC|1|L5|C|472
*
9AZC|1|L5|G|682
9AZC|1|L5|C|683
9AZC|1|L5|G|684
9AZC|1|L5|C|685
9AZC|1|L5|A|686
9AZC|1|L5|U|687
9AZC|1|L5|U|688
9AZC|1|L5|U|689

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Lr

60S ribosomal protein L28