IL_9AZC_154

3D structure

PDB id

9AZC (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human 80S ribosome (Consensus map)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

ACAUUU*ACCAU

Length

11 nucleotides

Bulged bases

9AZC|1|L5|C|4670, 9AZC|1|L5|C|4671

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AZC|1|L5|A|4624
9AZC|1|L5|C|4625
9AZC|1|L5|A|4626
9AZC|1|L5|U|4627
9AZC|1|L5|U|4628
9AZC|1|L5|U|4629
*
9AZC|1|L5|A|4669
9AZC|1|L5|C|4670
9AZC|1|L5|C|4671
9AZC|1|L5|A|4672
9AZC|1|L5|U|4673

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LV

60S ribosomal protein L23

Chain LW

60S ribosomal protein L24